Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 AC234783.1-201ENST00000441761 496 ntBASIC16.18■□□□□ 0.18
TUBP50607 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBP50607 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBP50607 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBP50607 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBP50607 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 MIR6752-201ENST00000618442 71 ntBASIC16.18■□□□□ 0.18
TUBP50607 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.18■□□□□ 0.18
TUBP50607 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBP50607 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TUBP50607 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBP50607 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 AC009090.5-201ENST00000624886 2285 ntBASIC16.17■□□□□ 0.18
TUBP50607 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 AC018665.1-201ENST00000622927 1362 ntBASIC16.17■□□□□ 0.18
TUBP50607 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TUBP50607 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 BAATP1-201ENST00000412284 1225 ntBASIC16.17■□□□□ 0.18
TUBP50607 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 AC012441.1-201ENST00000446669 685 ntBASIC16.17■□□□□ 0.18
TUBP50607 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBP50607 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 AC022137.2-201ENST00000503482 481 ntBASIC16.17■□□□□ 0.18
TUBP50607 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 AP001889.1-201ENST00000525414 633 ntBASIC16.17■□□□□ 0.18
TUBP50607 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 AC025181.2-201ENST00000606994 802 ntBASIC16.17■□□□□ 0.18
TUBP50607 AL008721.1-201ENST00000609964 604 ntBASIC16.17■□□□□ 0.18
TUBP50607 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.17■□□□□ 0.18
TUBP50607 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TUBP50607 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.17■□□□□ 0.18
TUBP50607 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TUBP50607 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TUBP50607 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 AC068587.6-202ENST00000641839 5619 ntBASIC16.16■□□□□ 0.18
TUBP50607 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBP50607 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms