Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.3■□□□□ 0.04
CSNK1DP48730 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1DP48730 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.3■□□□□ 0.04
CSNK1DP48730 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CSNK1DP48730 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1DP48730 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1DP48730 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1DP48730 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1DP48730 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CSNK1DP48730 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CSNK1DP48730 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1DP48730 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1DP48730 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.29■□□□□ 0.04
CSNK1DP48730 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 MESTP3-201ENST00000503460 968 ntBASIC15.29■□□□□ 0.04
CSNK1DP48730 IGHV3-71-201ENST00000523324 359 ntBASIC15.29■□□□□ 0.04
CSNK1DP48730 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.29■□□□□ 0.04
CSNK1DP48730 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 AC006453.4-201ENST00000636949 1252 ntBASIC15.29■□□□□ 0.04
CSNK1DP48730 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CSNK1DP48730 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CSNK1DP48730 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CSNK1DP48730 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 AGAP7P-201ENST00000582299 2062 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 AGAP14-201ENST00000624701 2060 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 ACE3P-201ENST00000423435 1973 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.28■□□□□ 0.04
CSNK1DP48730 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 FAM197Y7-201ENST00000432892 766 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 ATP5G2P4-201ENST00000442175 420 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 CTBP2P5-201ENST00000454986 1264 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 FO681548.1-201ENST00000455617 1132 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.28■□□□□ 0.04
CSNK1DP48730 MIR6805-201ENST00000615055 62 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CSNK1DP48730 MIR6775-201ENST00000617557 69 ntBASIC15.28■□□□□ 0.04
CSNK1DP48730 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CSNK1DP48730 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CSNK1DP48730 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms