Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.57□□□□□ -0.4
CEACAM3P40198 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.57□□□□□ -0.4
CEACAM3P40198 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CEACAM3P40198 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.57□□□□□ -0.4
CEACAM3P40198 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
CEACAM3P40198 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CEACAM3P40198 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CEACAM3P40198 AC092053.3-201ENST00000641308 4975 ntBASIC12.57□□□□□ -0.4
CEACAM3P40198 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CEACAM3P40198 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.56□□□□□ -0.4
CEACAM3P40198 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 SOCS2P1-201ENST00000417727 557 ntBASIC12.56□□□□□ -0.4
CEACAM3P40198 AC004066.1-201ENST00000502488 802 ntBASIC12.56□□□□□ -0.4
CEACAM3P40198 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.56□□□□□ -0.4
CEACAM3P40198 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 AC133539.2-201ENST00000604757 467 ntBASIC12.56□□□□□ -0.4
CEACAM3P40198 TMEM261P1-201ENST00000604899 340 ntBASIC12.56□□□□□ -0.4
CEACAM3P40198 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CEACAM3P40198 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
CEACAM3P40198 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 AC126365.1-201ENST00000578585 1514 ntBASIC12.56□□□□□ -0.4
CEACAM3P40198 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.56□□□□□ -0.4
CEACAM3P40198 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CEACAM3P40198 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CEACAM3P40198 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 INTS4P2-202ENST00000614726 2019 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 AC136621.1-201ENST00000624017 2304 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 AC132872.4-202ENST00000622924 2756 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.55□□□□□ -0.4
CEACAM3P40198 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.55□□□□□ -0.4
CEACAM3P40198 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
CEACAM3P40198 AC190387.1-201ENST00000551683 408 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.55□□□□□ -0.4
CEACAM3P40198 AC138761.1-201ENST00000584393 385 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.55□□□□□ -0.4
CEACAM3P40198 BRI3BPP1-201ENST00000594224 787 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.55□□□□□ -0.4
CEACAM3P40198 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.55□□□□□ -0.4
CEACAM3P40198 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.55□□□□□ -0.4
CEACAM3P40198 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CEACAM3P40198 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CEACAM3P40198 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms