Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.05□□□□□ -0.32
VAMP1P23763 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
VAMP1P23763 PRYP6-201ENST00000514804 343 ntBASIC13.05□□□□□ -0.32
VAMP1P23763 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.05□□□□□ -0.32
VAMP1P23763 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.05□□□□□ -0.32
VAMP1P23763 OR7E47P-204ENST00000575924 449 ntBASIC13.05□□□□□ -0.32
VAMP1P23763 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.05□□□□□ -0.32
VAMP1P23763 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.05□□□□□ -0.32
VAMP1P23763 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.05□□□□□ -0.32
VAMP1P23763 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.05□□□□□ -0.32
VAMP1P23763 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VAMP1P23763 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.05□□□□□ -0.32
VAMP1P23763 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 CICP11-201ENST00000434745 2827 ntBASIC13.05□□□□□ -0.32
VAMP1P23763 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VAMP1P23763 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VAMP1P23763 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VAMP1P23763 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
VAMP1P23763 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.04□□□□□ -0.32
VAMP1P23763 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 AC113367.3-201ENST00000508316 1912 ntBASIC13.04□□□□□ -0.32
VAMP1P23763 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.04□□□□□ -0.32
VAMP1P23763 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.04□□□□□ -0.32
VAMP1P23763 OR7E14P-202ENST00000530490 1290 ntBASIC13.04□□□□□ -0.32
VAMP1P23763 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.04□□□□□ -0.32
VAMP1P23763 AC109635.5-201ENST00000533593 962 ntBASIC13.04□□□□□ -0.32
VAMP1P23763 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.04□□□□□ -0.32
VAMP1P23763 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.04□□□□□ -0.32
VAMP1P23763 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 AL450472.2-201ENST00000603663 1156 ntBASIC13.04□□□□□ -0.32
VAMP1P23763 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 AC004790.2-201ENST00000623588 572 ntBASIC13.04□□□□□ -0.32
VAMP1P23763 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VAMP1P23763 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VAMP1P23763 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VAMP1P23763 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.04□□□□□ -0.32
VAMP1P23763 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
VAMP1P23763 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VAMP1P23763 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VAMP1P23763 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.03□□□□□ -0.32
VAMP1P23763 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
VAMP1P23763 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms