Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.02□□□□□ -0.17
CD53P19397 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CD53P19397 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
CD53P19397 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 BANF1P1-201ENST00000553684 263 ntBASIC14.02□□□□□ -0.17
CD53P19397 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.02□□□□□ -0.17
CD53P19397 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.02□□□□□ -0.17
CD53P19397 AC104794.3-201ENST00000566840 1248 ntBASIC14.02□□□□□ -0.17
CD53P19397 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CD53P19397 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 AC017083.2-201ENST00000608069 979 ntBASIC14.02□□□□□ -0.17
CD53P19397 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CD53P19397 MIR6799-201ENST00000620297 69 ntBASIC14.02□□□□□ -0.17
CD53P19397 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CD53P19397 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.02□□□□□ -0.17
CD53P19397 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.02□□□□□ -0.17
CD53P19397 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 AC023024.2-201ENST00000623561 1993 ntBASIC14.02□□□□□ -0.17
CD53P19397 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD53P19397 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CD53P19397 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 AC005912.2-201ENST00000619492 2400 ntBASIC14.01□□□□□ -0.17
CD53P19397 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CD53P19397 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 AL512384.1-201ENST00000406683 331 ntBASIC14.01□□□□□ -0.17
CD53P19397 AL080243.2-201ENST00000418783 582 ntBASIC14.01□□□□□ -0.17
CD53P19397 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 ZNF890P-202ENST00000530367 1156 ntBASIC14.01□□□□□ -0.17
CD53P19397 AL079307.3-201ENST00000556114 283 ntBASIC14.01□□□□□ -0.17
CD53P19397 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.01□□□□□ -0.17
CD53P19397 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 AL133215.2-201ENST00000609242 977 ntBASIC14.01□□□□□ -0.17
CD53P19397 AL162274.1-201ENST00000617191 1098 ntBASIC14.01□□□□□ -0.17
CD53P19397 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
CD53P19397 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD53P19397 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.01□□□□□ -0.17
CD53P19397 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD53P19397 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CD53P19397 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD53P19397 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14□□□□□ -0.17
CD53P19397 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms