Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 AC018892.3-201ENST00000623986 2499 ntBASIC15.35■□□□□ 0.05
XRCC1P18887 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
XRCC1P18887 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
XRCC1P18887 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 KRT18P64-201ENST00000434946 1219 ntBASIC15.35■□□□□ 0.05
XRCC1P18887 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 ELK1P1-201ENST00000485699 580 ntBASIC15.35■□□□□ 0.05
XRCC1P18887 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.35■□□□□ 0.05
XRCC1P18887 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.35■□□□□ 0.05
XRCC1P18887 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.35■□□□□ 0.05
XRCC1P18887 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 AL158212.4-201ENST00000624062 1286 ntBASIC15.35■□□□□ 0.05
XRCC1P18887 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
XRCC1P18887 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
XRCC1P18887 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
XRCC1P18887 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 AC098850.1-201ENST00000419919 790 ntBASIC15.34■□□□□ 0.05
XRCC1P18887 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 AC036164.1-201ENST00000570544 333 ntBASIC15.34■□□□□ 0.05
XRCC1P18887 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
XRCC1P18887 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.34■□□□□ 0.05
XRCC1P18887 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.34■□□□□ 0.05
XRCC1P18887 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
XRCC1P18887 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
XRCC1P18887 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
XRCC1P18887 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.33■□□□□ 0.05
XRCC1P18887 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
XRCC1P18887 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
XRCC1P18887 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
XRCC1P18887 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
XRCC1P18887 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
XRCC1P18887 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.33■□□□□ 0.05
XRCC1P18887 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.33■□□□□ 0.04
XRCC1P18887 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC1P18887 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
XRCC1P18887 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
XRCC1P18887 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.33■□□□□ 0.04
XRCC1P18887 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC1P18887 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC1P18887 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC1P18887 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
XRCC1P18887 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
XRCC1P18887 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.33■□□□□ 0.04
XRCC1P18887 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms