Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGA1P17096 CALR4P-201ENST00000431943 946 ntBASIC15.73■□□□□ 0.11
HMGA1P17096 BX284668.4-201ENST00000453917 508 ntBASIC15.73■□□□□ 0.11
HMGA1P17096 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.73■□□□□ 0.11
HMGA1P17096 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HMGA1P17096 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGA1P17096 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.73■□□□□ 0.11
HMGA1P17096 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.73■□□□□ 0.11
HMGA1P17096 MIR4783-201ENST00000580343 82 ntBASIC15.73■□□□□ 0.11
HMGA1P17096 AC007663.3-201ENST00000609632 465 ntBASIC15.73■□□□□ 0.11
HMGA1P17096 AC244452.3-201ENST00000636814 210 ntBASIC15.73■□□□□ 0.11
HMGA1P17096 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGA1P17096 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HMGA1P17096 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGA1P17096 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 AL138725.1-201ENST00000407347 1314 ntBASIC15.72■□□□□ 0.11
HMGA1P17096 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGA1P17096 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.72■□□□□ 0.11
HMGA1P17096 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGA1P17096 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGA1P17096 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 AL451050.2-201ENST00000606967 682 ntBASIC15.72■□□□□ 0.11
HMGA1P17096 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGA1P17096 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HMGA1P17096 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGA1P17096 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGA1P17096 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 AC138028.6-201ENST00000616106 1482 ntBASIC15.71■□□□□ 0.11
HMGA1P17096 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HMGA1P17096 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HMGA1P17096 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.71■□□□□ 0.11
HMGA1P17096 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.71■□□□□ 0.11
HMGA1P17096 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.71■□□□□ 0.11
HMGA1P17096 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.71■□□□□ 0.11
HMGA1P17096 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 AC002472.3-201ENST00000640124 621 ntBASIC15.71■□□□□ 0.11
HMGA1P17096 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGA1P17096 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGA1P17096 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
HMGA1P17096 AC008741.2-201ENST00000612792 3115 ntBASIC15.71■□□□□ 0.11
HMGA1P17096 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms