Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.82■□□□□ 0.28
CLTAP09496 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CLTAP09496 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLTAP09496 AL138799.1-201ENST00000448213 1675 ntBASIC16.81■□□□□ 0.28
CLTAP09496 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLTAP09496 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.81■□□□□ 0.28
CLTAP09496 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.81■□□□□ 0.28
CLTAP09496 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.81■□□□□ 0.28
CLTAP09496 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 AC015936.2-201ENST00000593177 259 ntBASIC16.81■□□□□ 0.28
CLTAP09496 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 AL645728.2-202ENST00000641679 227 ntBASIC16.81■□□□□ 0.28
CLTAP09496 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLTAP09496 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.81■□□□□ 0.28
CLTAP09496 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLTAP09496 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLTAP09496 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 AC013268.4-201ENST00000637413 2228 ntBASIC16.8■□□□□ 0.28
CLTAP09496 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.8■□□□□ 0.28
CLTAP09496 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.8■□□□□ 0.28
CLTAP09496 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 AP001063.1-201ENST00000568332 529 ntBASIC16.8■□□□□ 0.28
CLTAP09496 AC009486.1-201ENST00000569860 813 ntBASIC16.8■□□□□ 0.28
CLTAP09496 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.8■□□□□ 0.28
CLTAP09496 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 CLUHP6-201ENST00000580789 941 ntBASIC16.8■□□□□ 0.28
CLTAP09496 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.8■□□□□ 0.28
CLTAP09496 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.8■□□□□ 0.28
CLTAP09496 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.8■□□□□ 0.28
CLTAP09496 AC005252.2-201ENST00000624630 1141 ntBASIC16.8■□□□□ 0.28
CLTAP09496 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.8■□□□□ 0.28
CLTAP09496 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLTAP09496 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
CLTAP09496 TCAF2P1-201ENST00000291129 2421 ntBASIC16.8■□□□□ 0.28
CLTAP09496 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.8■□□□□ 0.28
CLTAP09496 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLTAP09496 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
CLTAP09496 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLTAP09496 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CLTAP09496 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms