Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LINC02084-201ENST00000606069 1096 ntBASIC15.38■□□□□ 0.05
MMP2P08253 AC105233.6-201ENST00000642093 218 ntBASIC15.38■□□□□ 0.05
MMP2P08253 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MMP2P08253 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MMP2P08253 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
MMP2P08253 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
MMP2P08253 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
MMP2P08253 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.37■□□□□ 0.05
MMP2P08253 ACTBP8-201ENST00000403258 1108 ntBASIC15.37■□□□□ 0.05
MMP2P08253 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.37■□□□□ 0.05
MMP2P08253 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 AC009486.1-201ENST00000569860 813 ntBASIC15.37■□□□□ 0.05
MMP2P08253 AC132938.2-201ENST00000579188 680 ntBASIC15.37■□□□□ 0.05
MMP2P08253 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.37■□□□□ 0.05
MMP2P08253 IGHV3-72-202ENST00000621503 303 ntBASIC15.37■□□□□ 0.05
MMP2P08253 AL591163.1-201ENST00000641757 987 ntBASIC15.37■□□□□ 0.05
MMP2P08253 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 LINC01101-201ENST00000622953 1884 ntBASIC15.37■□□□□ 0.05
MMP2P08253 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.37■□□□□ 0.05
MMP2P08253 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
MMP2P08253 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
MMP2P08253 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MMP2P08253 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
MMP2P08253 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
MMP2P08253 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.36■□□□□ 0.05
MMP2P08253 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.36■□□□□ 0.05
MMP2P08253 AC012441.1-201ENST00000446669 685 ntBASIC15.36■□□□□ 0.05
MMP2P08253 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.36■□□□□ 0.05
MMP2P08253 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 AC023090.2-201ENST00000625182 2110 ntBASIC15.36■□□□□ 0.05
MMP2P08253 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MMP2P08253 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.36■□□□□ 0.05
MMP2P08253 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms