Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CAPNS1P04632 AC105129.2-201ENST00000559536 390 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 AC010328.2-201ENST00000597698 1111 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 AL118558.3-201ENST00000607414 1079 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 AC074044.1-201ENST00000609673 707 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.3■□□□□ 0.04
CAPNS1P04632 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CAPNS1P04632 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CAPNS1P04632 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CAPNS1P04632 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 AGAP7P-201ENST00000582299 2062 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 AGAP14-201ENST00000624701 2060 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPNS1P04632 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPNS1P04632 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.29■□□□□ 0.04
CAPNS1P04632 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 AL442647.2-201ENST00000429864 857 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 AL162726.2-201ENST00000438986 1017 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 AC253536.4-201ENST00000440539 267 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 TDH-203ENST00000531764 1110 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPNS1P04632 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPNS1P04632 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.29■□□□□ 0.04
CAPNS1P04632 AC025048.3-201ENST00000590609 569 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.29■□□□□ 0.04
CAPNS1P04632 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CAPNS1P04632 AC005702.4-201ENST00000618393 416 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 AC009542.2-202ENST00000619004 1067 ntBASIC15.29■□□□□ 0.04
CAPNS1P04632 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.29■□□□□ 0.04
CAPNS1P04632 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CAPNS1P04632 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CAPNS1P04632 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPNS1P04632 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CAPNS1P04632 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.28■□□□□ 0.04
CAPNS1P04632 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CAPNS1P04632 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CAPNS1P04632 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CAPNS1P04632 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CAPNS1P04632 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 YBX1P6-201ENST00000442962 1002 ntBASIC15.28■□□□□ 0.04
CAPNS1P04632 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 AP001258.2-201ENST00000529891 490 ntBASIC15.28■□□□□ 0.04
CAPNS1P04632 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPNS1P04632 RN7SL560P-201ENST00000577943 264 ntBASIC15.28■□□□□ 0.04
CAPNS1P04632 MIR4706-201ENST00000582134 82 ntBASIC15.28■□□□□ 0.04
CAPNS1P04632 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.28■□□□□ 0.04
CAPNS1P04632 AC091271.1-201ENST00000611877 1162 ntBASIC15.28■□□□□ 0.04
CAPNS1P04632 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms