Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDKL5O76039 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDKL5O76039 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 AC087499.6-201ENST00000411576 835 ntBASIC17.84■□□□□ 0.45
CDKL5O76039 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDKL5O76039 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDKL5O76039 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKL5O76039 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKL5O76039 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKL5O76039 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL5O76039 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL5O76039 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CDKL5O76039 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.83■□□□□ 0.45
CDKL5O76039 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.45
CDKL5O76039 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL5O76039 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
CDKL5O76039 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL5O76039 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL5O76039 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL5O76039 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CDKL5O76039 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDKL5O76039 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.83■□□□□ 0.45
CDKL5O76039 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 AL360270.3-201ENST00000609118 1348 ntBASIC17.83■□□□□ 0.44
CDKL5O76039 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDKL5O76039 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKL5O76039 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKL5O76039 AC134915.1-201ENST00000426461 574 ntBASIC17.83■□□□□ 0.44
CDKL5O76039 AL442647.2-201ENST00000429864 857 ntBASIC17.83■□□□□ 0.44
CDKL5O76039 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.83■□□□□ 0.44
CDKL5O76039 BCRP1-201ENST00000444246 691 ntBASIC17.83■□□□□ 0.44
CDKL5O76039 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKL5O76039 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.83■□□□□ 0.44
CDKL5O76039 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.83■□□□□ 0.44
CDKL5O76039 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.83■□□□□ 0.44
CDKL5O76039 AL132655.2-201ENST00000596276 594 ntBASIC17.83■□□□□ 0.44
CDKL5O76039 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL5O76039 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL5O76039 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.82■□□□□ 0.44
CDKL5O76039 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 FGD5P1-202ENST00000614866 2498 ntBASIC17.82■□□□□ 0.44
CDKL5O76039 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.82■□□□□ 0.44
CDKL5O76039 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.82■□□□□ 0.44
CDKL5O76039 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
CDKL5O76039 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDKL5O76039 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.82■□□□□ 0.44
CDKL5O76039 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL5O76039 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms