Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
RFPL1O75677 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 AC012508.2-201ENST00000567613 1472 ntBASIC15.41■□□□□ 0.06
RFPL1O75677 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RFPL1O75677 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.41■□□□□ 0.06
RFPL1O75677 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.41■□□□□ 0.06
RFPL1O75677 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.41■□□□□ 0.06
RFPL1O75677 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.41■□□□□ 0.06
RFPL1O75677 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.41■□□□□ 0.06
RFPL1O75677 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.41■□□□□ 0.06
RFPL1O75677 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.41■□□□□ 0.06
RFPL1O75677 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 AC007967.4-201ENST00000614700 386 ntBASIC15.41■□□□□ 0.06
RFPL1O75677 SPDYE12P-201ENST00000618416 771 ntBASIC15.41■□□□□ 0.06
RFPL1O75677 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.41■□□□□ 0.06
RFPL1O75677 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.41■□□□□ 0.06
RFPL1O75677 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.41■□□□□ 0.06
RFPL1O75677 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.41■□□□□ 0.06
RFPL1O75677 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RFPL1O75677 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFPL1O75677 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 AC018442.1-201ENST00000421439 2061 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 AP001267.2-201ENST00000532619 2086 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 CICP4-201ENST00000447359 2812 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
RFPL1O75677 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 INTS4P1-203ENST00000641008 3683 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.4■□□□□ 0.06
RFPL1O75677 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RFPL1O75677 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.4■□□□□ 0.06
RFPL1O75677 MRPS18AP1-201ENST00000414458 589 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 RN7SL692P-201ENST00000464677 288 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 SLED1-202ENST00000512051 380 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
RFPL1O75677 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 AL645728.2-202ENST00000641679 227 ntBASIC15.4■□□□□ 0.06
RFPL1O75677 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.4■□□□□ 0.06
RFPL1O75677 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RFPL1O75677 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RFPL1O75677 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms