Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
USH2AO75445 NME6-208ENST00000435684 599 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC6.64□□□□□ -1.35
USH2AO75445 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 MIR4472-1-201ENST00000584349 80 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC008972.2-201ENST00000606587 494 ntBASIC6.64□□□□□ -1.35
USH2AO75445 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC002044.2-201ENST00000624910 970 ntBASIC6.64□□□□□ -1.35
USH2AO75445 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 B9D1-203ENST00000395615 805 ntTSL 3 BASIC6.64□□□□□ -1.35
USH2AO75445 MIR1301-201ENST00000408518 82 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 SLC25A15P1-201ENST00000456738 342 ntBASIC6.64□□□□□ -1.35
USH2AO75445 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 SLC25A15P3-201ENST00000505530 290 ntBASIC6.64□□□□□ -1.35
USH2AO75445 ABCC6P2-201ENST00000526069 590 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC6.64□□□□□ -1.35
USH2AO75445 HERC2P11-201ENST00000562845 725 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC091304.3-201ENST00000566500 716 ntBASIC6.64□□□□□ -1.35
USH2AO75445 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC6.64□□□□□ -1.35
USH2AO75445 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 AC106886.4-201ENST00000623557 2502 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 PES1-204ENST00000402284 2144 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
USH2AO75445 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 AC012508.2-201ENST00000567613 1472 ntBASIC6.64□□□□□ -1.35
USH2AO75445 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 FLII-221ENST00000578558 2377 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 MBP-201ENST00000354542 575 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
USH2AO75445 TPT1P6-201ENST00000458298 514 ntBASIC6.64□□□□□ -1.35
USH2AO75445 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 RN7SL578P-201ENST00000477781 283 ntBASIC6.64□□□□□ -1.35
USH2AO75445 TMA16-204ENST00000508268 608 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC6.64□□□□□ -1.35
USH2AO75445 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 AC013553.1-201ENST00000560906 267 ntBASIC6.64□□□□□ -1.35
USH2AO75445 MIR4640-201ENST00000581824 90 ntBASIC6.64□□□□□ -1.35
USH2AO75445 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 AC139713.2-207ENST00000641556 1292 ntBASIC6.64□□□□□ -1.35
USH2AO75445 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC6.64□□□□□ -1.35
USH2AO75445 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
USH2AO75445 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
USH2AO75445 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
USH2AO75445 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
USH2AO75445 PGAM1P11-201ENST00000416729 680 ntBASIC6.63□□□□□ -1.35
USH2AO75445 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC6.63□□□□□ -1.35
USH2AO75445 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC6.63□□□□□ -1.35
USH2AO75445 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
USH2AO75445 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
USH2AO75445 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms