Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZIC3O60481 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZIC3O60481 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.76□□□□□ -0.21
ZIC3O60481 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC3O60481 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC3O60481 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZIC3O60481 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 MIR658-201ENST00000385210 100 ntBASIC13.75□□□□□ -0.21
ZIC3O60481 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC3O60481 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC3O60481 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC3O60481 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 AC104989.1-201ENST00000519711 778 ntBASIC13.75□□□□□ -0.21
ZIC3O60481 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC3O60481 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC3O60481 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC3O60481 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 MIR6805-201ENST00000615055 62 ntBASIC13.75□□□□□ -0.21
ZIC3O60481 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZIC3O60481 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 AL137783.1-201ENST00000623494 1896 ntBASIC13.75□□□□□ -0.21
ZIC3O60481 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 AC091951.1-201ENST00000512854 2465 ntBASIC13.75□□□□□ -0.21
ZIC3O60481 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.75□□□□□ -0.21
ZIC3O60481 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.75□□□□□ -0.21
ZIC3O60481 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZIC3O60481 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.75□□□□□ -0.21
ZIC3O60481 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
ZIC3O60481 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.74□□□□□ -0.21
ZIC3O60481 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZIC3O60481 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.74□□□□□ -0.21
ZIC3O60481 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.74□□□□□ -0.21
ZIC3O60481 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.74□□□□□ -0.21
ZIC3O60481 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.74□□□□□ -0.21
ZIC3O60481 KRT90P-201ENST00000549264 1064 ntBASIC13.74□□□□□ -0.21
ZIC3O60481 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.74□□□□□ -0.21
ZIC3O60481 AP005482.1-201ENST00000563722 1273 ntBASIC13.74□□□□□ -0.21
ZIC3O60481 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.74□□□□□ -0.21
ZIC3O60481 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms