Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.67□□□□□ -0.06
LCMT2O60294 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.67□□□□□ -0.06
LCMT2O60294 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.67□□□□□ -0.06
LCMT2O60294 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.67□□□□□ -0.06
LCMT2O60294 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LCMT2O60294 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LCMT2O60294 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LCMT2O60294 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LCMT2O60294 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.66□□□□□ -0.06
LCMT2O60294 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.66□□□□□ -0.06
LCMT2O60294 AC093433.1-201ENST00000458048 571 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 AC132938.2-201ENST00000579188 680 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.66□□□□□ -0.06
LCMT2O60294 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LCMT2O60294 AL591163.1-201ENST00000641757 987 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 PRSS30P-206ENST00000641773 873 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 ZBED1P1-201ENST00000502364 1930 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 AC023824.1-201ENST00000562945 2975 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LCMT2O60294 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 AL360270.3-201ENST00000609118 1348 ntBASIC14.66□□□□□ -0.06
LCMT2O60294 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LCMT2O60294 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LCMT2O60294 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LCMT2O60294 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.65□□□□□ -0.06
LCMT2O60294 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LCMT2O60294 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LCMT2O60294 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms