Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.23■□□□□ 0.35
DDX39AO00148 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 KRT90P-201ENST00000549264 1064 ntBASIC17.23■□□□□ 0.35
DDX39AO00148 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
DDX39AO00148 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.23■□□□□ 0.35
DDX39AO00148 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.23■□□□□ 0.35
DDX39AO00148 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DDX39AO00148 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.23■□□□□ 0.35
DDX39AO00148 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DDX39AO00148 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
DDX39AO00148 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.23■□□□□ 0.35
DDX39AO00148 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DDX39AO00148 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX39AO00148 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 TSPY26P-202ENST00000565928 3884 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX39AO00148 ACTBP8-201ENST00000403258 1108 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 AL139094.1-201ENST00000405549 1188 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 FAM197Y7-201ENST00000432892 766 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 RPS2P32-201ENST00000439199 892 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 RPL7P3-201ENST00000441388 714 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 AC114812.1-204ENST00000449669 728 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX39AO00148 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.22■□□□□ 0.35
DDX39AO00148 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.22■□□□□ 0.35
DDX39AO00148 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 AC025279.2-201ENST00000569730 653 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.22■□□□□ 0.35
DDX39AO00148 MIR6752-201ENST00000618442 71 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 AC023024.2-201ENST00000623561 1993 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 PPT1-215ENST00000641471 2368 ntBASIC17.22■□□□□ 0.35
DDX39AO00148 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DDX39AO00148 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DDX39AO00148 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.21■□□□□ 0.35
DDX39AO00148 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
DDX39AO00148 AC073347.1-201ENST00000421633 2643 ntBASIC17.21■□□□□ 0.35
DDX39AO00148 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 AL138709.1-201ENST00000614840 1693 ntBASIC17.21■□□□□ 0.35
DDX39AO00148 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.21■□□□□ 0.35
DDX39AO00148 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 AC099336.1-201ENST00000417053 1171 ntBASIC17.21■□□□□ 0.35
DDX39AO00148 NUS1P3-201ENST00000423502 862 ntBASIC17.21■□□□□ 0.35
DDX39AO00148 HLA-V-201ENST00000429037 534 ntBASIC17.21■□□□□ 0.35
DDX39AO00148 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.21■□□□□ 0.35
DDX39AO00148 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
DDX39AO00148 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.21■□□□□ 0.35
DDX39AO00148 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.21■□□□□ 0.35
DDX39AO00148 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DDX39AO00148 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DDX39AO00148 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms