Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC023157.3-201ENST00000619086 2088 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AL133267.1-201ENST00000398220 340 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC025279.2-201ENST00000569730 653 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC015910.1-201ENST00000579400 975 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 MIR3615-201ENST00000581999 87 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 AC134407.2-201ENST00000625089 1978 ntBASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGA9Q9Y5G4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AC006001.1-201ENST00000325130 474 ntBASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 KRT18P25-201ENST00000508931 1278 ntBASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 AP005019.2-201ENST00000615104 511 ntBASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 CICP14-201ENST00000629111 2732 ntBASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 PRAL-201ENST00000624952 3286 ntBASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGA9Q9Y5G4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms