Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 CALR4P-201ENST00000431943 946 ntBASIC15.9■□□□□ 0.14
YIPF1Q9Y548 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 AC244452.3-201ENST00000636814 210 ntBASIC15.9■□□□□ 0.14
YIPF1Q9Y548 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 AL137783.1-201ENST00000623494 1896 ntBASIC15.9■□□□□ 0.14
YIPF1Q9Y548 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 AL359258.3-201ENST00000622910 2331 ntBASIC15.9■□□□□ 0.14
YIPF1Q9Y548 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 AC012508.2-201ENST00000567613 1472 ntBASIC15.9■□□□□ 0.14
YIPF1Q9Y548 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
YIPF1Q9Y548 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.89■□□□□ 0.13
YIPF1Q9Y548 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 SCARNA20.5-201ENST00000516991 142 ntBASIC15.89■□□□□ 0.13
YIPF1Q9Y548 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
YIPF1Q9Y548 AC020658.6-201ENST00000623564 1870 ntBASIC15.88■□□□□ 0.13
YIPF1Q9Y548 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
YIPF1Q9Y548 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms