Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 MTHFR-210ENST00000641407 2387 ntBASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBQLN2Q9UHD9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AC005622.1-201ENST00000636801 1703 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 SCARNA2-201ENST00000458748 420 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AC009078.2-202ENST00000463353 338 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AC073648.2-201ENST00000510116 352 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 SART3-203ENST00000546611 1184 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AP000867.4-201ENST00000641616 219 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 PMPCAP1-201ENST00000508114 1576 ntBASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBQLN2Q9UHD9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 AL353593.2-201ENST00000602529 1483 ntBASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.05□□□□□ -0.32
UBQLN2Q9UHD9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms