Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX1-2Q9UD57 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 TERF1P1-201ENST00000311003 1181 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 AC004945.1-201ENST00000416738 983 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 DRAXINP1-201ENST00000437611 948 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 KRT18P34-201ENST00000488218 1270 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 HNRNPUP1-201ENST00000554987 333 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ACTL9-202ENST00000612068 1252 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX1-2Q9UD57 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 MIR497HG-202ENST00000572453 3838 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AC004987.2-201ENST00000395959 1148 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AC132008.2-207ENST00000454517 770 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 RPS15P9-201ENST00000494093 319 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AC074051.2-201ENST00000565115 352 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AL121672.3-201ENST00000608644 468 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 AC006011.2-201ENST00000621313 1158 ntBASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX1-2Q9UD57 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms