Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 UPF3AP2-201ENST00000457924 1132 ntBASIC17.01■□□□□ 0.31
VTA1Q9NP79 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 AL358472.3-201ENST00000608147 415 ntBASIC17.01■□□□□ 0.31
VTA1Q9NP79 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 PCDHB19P-201ENST00000570871 2371 ntBASIC17.01■□□□□ 0.31
VTA1Q9NP79 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
VTA1Q9NP79 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.01■□□□□ 0.31
VTA1Q9NP79 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 DPM3-202ENST00000368399 517 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17■□□□□ 0.31
VTA1Q9NP79 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17■□□□□ 0.31
VTA1Q9NP79 HLA-DPB2-205ENST00000435074 1188 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 TUBB8P8-201ENST00000458717 1058 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 AC022217.1-201ENST00000521069 738 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 AC105129.2-201ENST00000559536 390 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17■□□□□ 0.31
VTA1Q9NP79 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17■□□□□ 0.31
VTA1Q9NP79 BNIP3P13-201ENST00000599968 566 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 AC138696.2-201ENST00000607376 223 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 AL136301.1-201ENST00000615830 422 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17■□□□□ 0.31
VTA1Q9NP79 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17■□□□□ 0.31
VTA1Q9NP79 AC002472.3-201ENST00000640124 621 ntBASIC17■□□□□ 0.31
VTA1Q9NP79 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VTA1Q9NP79 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VTA1Q9NP79 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VTA1Q9NP79 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 TUBBP5-203ENST00000508529 1334 ntBASIC16.99■□□□□ 0.31
VTA1Q9NP79 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 AL137783.1-201ENST00000623494 1896 ntBASIC16.99■□□□□ 0.31
VTA1Q9NP79 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 SPTLC1P5-201ENST00000450718 252 ntBASIC16.99■□□□□ 0.31
VTA1Q9NP79 AC106794.1-201ENST00000506935 792 ntBASIC16.99■□□□□ 0.31
VTA1Q9NP79 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 CHMP4BP1-201ENST00000556017 588 ntBASIC16.99■□□□□ 0.31
VTA1Q9NP79 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 AC090616.6-203ENST00000579186 1945 ntBASIC16.99■□□□□ 0.31
VTA1Q9NP79 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.99■□□□□ 0.31
VTA1Q9NP79 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VTA1Q9NP79 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms