Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC105250.1-201ENST00000509378 2057 ntBASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 RN7SKP230-201ENST00000365642 335 ntBASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 RTN3P1-201ENST00000536295 711 ntBASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC132192.2-201ENST00000596206 1147 ntBASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 AC012044.1-201ENST00000603431 297 ntBASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RTFDC1Q9BY42 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 PCDHA1-201ENST00000378133 2726 ntBASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 RCC2P8-201ENST00000502779 1035 ntBASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 AC011840.2-201ENST00000563063 1520 ntBASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 AC138932.1-201ENST00000534164 6830 ntBASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RTFDC1Q9BY42 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 AL365203.3-201ENST00000609742 2057 ntBASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 FAM90A7P-201ENST00000382628 1395 ntBASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 FAM90A23P-201ENST00000400136 1395 ntBASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 KLF2P1-201ENST00000447438 1042 ntBASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 NAP1L6-202ENST00000641404 1222 ntBASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTFDC1Q9BY42 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTFDC1Q9BY42 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTFDC1Q9BY42 PRAL-201ENST00000624952 3286 ntBASIC18.34■□□□□ 0.53
RTFDC1Q9BY42 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTFDC1Q9BY42 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms