Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.08■□□□□ 0
COL25A1Q9BXS0 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC15.08■□□□□ 0
COL25A1Q9BXS0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL25A1Q9BXS0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COL25A1Q9BXS0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.08■□□□□ 0
COL25A1Q9BXS0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL25A1Q9BXS0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC018629.1-201ENST00000623381 1736 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 FAM86JP-202ENST00000484500 988 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC026434.2-201ENST00000506094 1078 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 RPS23-207ENST00000511844 530 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 RN7SL524P-201ENST00000581152 300 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 RN7SL478P-201ENST00000584358 298 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC138696.2-201ENST00000607376 223 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 AC106785.2-201ENST00000564385 1319 ntBASIC15.07■□□□□ 0
COL25A1Q9BXS0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL25A1Q9BXS0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.07■□□□□ 0
COL25A1Q9BXS0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC022188.1-201ENST00000620960 1664 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 OR10N1P-201ENST00000392758 869 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 DPY19L2P4-201ENST00000479881 442 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC087072.1-201ENST00000603727 421 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC022001.3-201ENST00000606330 596 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC005746.3-201ENST00000614751 393 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC139713.2-207ENST00000641556 1292 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 AC006372.4-201ENST00000624122 1543 ntBASIC15.06■□□□□ 0
COL25A1Q9BXS0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.06■□□□□ 0
COL25A1Q9BXS0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL25A1Q9BXS0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
COL25A1Q9BXS0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL25A1Q9BXS0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL25A1Q9BXS0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms