Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 LINC00528-201ENST00000600723 2160 ntBASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 FAM86HP-204ENST00000513466 959 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC025279.2-201ENST00000569730 653 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC010328.2-201ENST00000597698 1111 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC025181.2-201ENST00000606994 802 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 C2orf27AP3-201ENST00000434123 579 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 AL354718.3-201ENST00000616414 581 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 CR382287.1-201ENST00000623954 586 ntBASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RPAP1Q9BWH6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 AP002414.2-201ENST00000591780 3365 ntBASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 PFN1P12-201ENST00000455938 534 ntBASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 AC244093.1-201ENST00000610837 814 ntBASIC18.54■□□□□ 0.56
RPAP1Q9BWH6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms