Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC092337.1-201ENST00000568699 1129 ntBASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PCGF1Q9BSM1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 AP006294.1-201ENST00000415407 339 ntBASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PCGF1Q9BSM1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.96□□□□□ -0.33
PCGF1Q9BSM1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms