Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LITAFQ99732 SCARNA2-201ENST00000458748 420 ntBASIC10.22□□□□□ -0.77
LITAFQ99732 AC108073.2-201ENST00000464002 357 ntBASIC10.22□□□□□ -0.77
LITAFQ99732 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC10.22□□□□□ -0.77
LITAFQ99732 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 AC008608.2-201ENST00000606089 416 ntBASIC10.22□□□□□ -0.77
LITAFQ99732 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
LITAFQ99732 CICP16-201ENST00000502609 2813 ntBASIC10.22□□□□□ -0.77
LITAFQ99732 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LITAFQ99732 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LITAFQ99732 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LITAFQ99732 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 OS9-218ENST00000551035 2246 ntTSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.22□□□□□ -0.77
LITAFQ99732 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 AC012617.1-204ENST00000586340 2305 ntBASIC10.22□□□□□ -0.77
LITAFQ99732 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
LITAFQ99732 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LITAFQ99732 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LITAFQ99732 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 AC067750.1-201ENST00000608826 6545 ntBASIC10.21□□□□□ -0.77
LITAFQ99732 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.21□□□□□ -0.77
LITAFQ99732 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
LITAFQ99732 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC10.21□□□□□ -0.77
LITAFQ99732 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
LITAFQ99732 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.21□□□□□ -0.77
LITAFQ99732 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.21□□□□□ -0.77
LITAFQ99732 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LITAFQ99732 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.21□□□□□ -0.77
LITAFQ99732 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.21□□□□□ -0.77
LITAFQ99732 AL596275.1-201ENST00000423464 877 ntBASIC10.21□□□□□ -0.77
LITAFQ99732 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.21□□□□□ -0.77
LITAFQ99732 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LITAFQ99732 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.21□□□□□ -0.77
LITAFQ99732 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC10.21□□□□□ -0.77
LITAFQ99732 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.21□□□□□ -0.77
LITAFQ99732 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.21□□□□□ -0.77
LITAFQ99732 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.21□□□□□ -0.77
LITAFQ99732 AC073389.1-201ENST00000595595 795 ntBASIC10.21□□□□□ -0.77
LITAFQ99732 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
LITAFQ99732 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 AC020910.6-201ENST00000623084 1459 ntBASIC10.21□□□□□ -0.78
LITAFQ99732 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
LITAFQ99732 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 FOXO1B-201ENST00000504678 1527 ntBASIC10.21□□□□□ -0.78
LITAFQ99732 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LITAFQ99732 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.21□□□□□ -0.78
LITAFQ99732 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LITAFQ99732 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.21□□□□□ -0.78
LITAFQ99732 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.21□□□□□ -0.78
LITAFQ99732 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms