Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 AL033527.5-201ENST00000641382 801 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CCL13Q99616 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 AL138799.1-201ENST00000448213 1675 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 AL365209.1-201ENST00000624418 6473 ntBASIC12.88□□□□□ -0.35
CCL13Q99616 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.88□□□□□ -0.35
CCL13Q99616 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.88□□□□□ -0.35
CCL13Q99616 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCL13Q99616 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
CCL13Q99616 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCL13Q99616 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL13Q99616 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL13Q99616 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.87□□□□□ -0.35
CCL13Q99616 RN7SL752P-201ENST00000463779 287 ntBASIC12.87□□□□□ -0.35
CCL13Q99616 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.87□□□□□ -0.35
CCL13Q99616 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL13Q99616 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL13Q99616 AP001582.1-201ENST00000525856 295 ntBASIC12.87□□□□□ -0.35
CCL13Q99616 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.87□□□□□ -0.35
CCL13Q99616 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.87□□□□□ -0.35
CCL13Q99616 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.87□□□□□ -0.35
CCL13Q99616 AC124283.3-201ENST00000570869 594 ntBASIC12.87□□□□□ -0.35
CCL13Q99616 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL13Q99616 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.87□□□□□ -0.35
CCL13Q99616 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.87□□□□□ -0.35
CCL13Q99616 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.87□□□□□ -0.35
CCL13Q99616 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCL13Q99616 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
CCL13Q99616 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 KRT8P22-201ENST00000562317 1415 ntBASIC12.87□□□□□ -0.35
CCL13Q99616 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.87□□□□□ -0.35
CCL13Q99616 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCL13Q99616 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CCL13Q99616 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.86□□□□□ -0.35
CCL13Q99616 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 AC098614.1-201ENST00000368528 745 ntBASIC12.86□□□□□ -0.35
CCL13Q99616 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.86□□□□□ -0.35
CCL13Q99616 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.86□□□□□ -0.35
CCL13Q99616 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCL13Q99616 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.86□□□□□ -0.35
CCL13Q99616 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.86□□□□□ -0.35
CCL13Q99616 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms