Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.48■□□□□ 0.07
NDNQ99608 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.48■□□□□ 0.07
NDNQ99608 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.48■□□□□ 0.07
NDNQ99608 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 AC069120.2-201ENST00000524091 540 ntBASIC15.48■□□□□ 0.07
NDNQ99608 AC027369.6-201ENST00000525520 931 ntBASIC15.48■□□□□ 0.07
NDNQ99608 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.48■□□□□ 0.07
NDNQ99608 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.48■□□□□ 0.07
NDNQ99608 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.48■□□□□ 0.07
NDNQ99608 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.48■□□□□ 0.07
NDNQ99608 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.48■□□□□ 0.07
NDNQ99608 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 AP001160.2-201ENST00000596071 487 ntBASIC15.48■□□□□ 0.07
NDNQ99608 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 AL109936.8-201ENST00000641772 604 ntBASIC15.48■□□□□ 0.07
NDNQ99608 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.48■□□□□ 0.07
NDNQ99608 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.48■□□□□ 0.07
NDNQ99608 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NDNQ99608 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 AC107890.1-201ENST00000422478 521 ntBASIC15.47■□□□□ 0.07
NDNQ99608 RPL13P2-201ENST00000440687 659 ntBASIC15.47■□□□□ 0.07
NDNQ99608 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.47■□□□□ 0.07
NDNQ99608 AC117489.1-201ENST00000625169 3217 ntBASIC15.47■□□□□ 0.07
NDNQ99608 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.47■□□□□ 0.07
NDNQ99608 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.47■□□□□ 0.07
NDNQ99608 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDNQ99608 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.46■□□□□ 0.07
NDNQ99608 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NDNQ99608 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.46■□□□□ 0.07
NDNQ99608 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.46■□□□□ 0.07
NDNQ99608 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NDNQ99608 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.46■□□□□ 0.07
NDNQ99608 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDNQ99608 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms