Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NEK1Q96PY6 AL391825.1-201ENST00000457671 1364 ntBASIC18.17■□□□□ 0.5
NEK1Q96PY6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 AC236430.1-201ENST00000402231 743 ntBASIC18.16■□□□□ 0.5
NEK1Q96PY6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 AC123567.1-201ENST00000548294 1261 ntBASIC18.16■□□□□ 0.5
NEK1Q96PY6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 AC093813.1-201ENST00000605066 256 ntBASIC18.16■□□□□ 0.5
NEK1Q96PY6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 INTS4P2-202ENST00000614726 2019 ntBASIC18.16■□□□□ 0.5
NEK1Q96PY6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NEK1Q96PY6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
NEK1Q96PY6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AL157414.3-201ENST00000624276 1954 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC134915.1-201ENST00000426461 574 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC005034.1-201ENST00000426657 489 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC002472.2-201ENST00000442739 958 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 API5-211ENST00000534695 560 ntTSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC092552.1-201ENST00000547243 906 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC105233.6-201ENST00000642093 218 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 AC106881.1-201ENST00000605849 3329 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NEK1Q96PY6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.15■□□□□ 0.5
NEK1Q96PY6 NFIC-211ENST00000641145 8399 ntBASIC18.15■□□□□ 0.5
NEK1Q96PY6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NEK1Q96PY6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NEK1Q96PY6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NEK1Q96PY6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NEK1Q96PY6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
NEK1Q96PY6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 AL158070.2-201ENST00000623713 1621 ntBASIC18.14■□□□□ 0.49
NEK1Q96PY6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NEK1Q96PY6 AC087499.6-201ENST00000411576 835 ntBASIC18.14■□□□□ 0.49
NEK1Q96PY6 AL442647.2-201ENST00000429864 857 ntBASIC18.14■□□□□ 0.49
NEK1Q96PY6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.14■□□□□ 0.49
NEK1Q96PY6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms