Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.5■□□□□ 0.23
SNX27Q96L92 PFN1P12-201ENST00000455938 534 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 AC022616.1-201ENST00000518688 554 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AC079316.1-201ENST00000548397 411 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 ECM1P1-201ENST00000604092 1279 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 REXO1L5P-201ENST00000622260 2098 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.5■□□□□ 0.23
SNX27Q96L92 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNX27Q96L92 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNX27Q96L92 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.5■□□□□ 0.23
SNX27Q96L92 AL157414.3-201ENST00000624276 1954 ntBASIC16.49■□□□□ 0.23
SNX27Q96L92 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.49■□□□□ 0.23
SNX27Q96L92 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNX27Q96L92 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNX27Q96L92 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.49■□□□□ 0.23
SNX27Q96L92 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX27Q96L92 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 RNA5SP486-201ENST00000515961 83 ntBASIC16.49■□□□□ 0.23
SNX27Q96L92 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX27Q96L92 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNX27Q96L92 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNX27Q96L92 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.49■□□□□ 0.23
SNX27Q96L92 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNX27Q96L92 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNX27Q96L92 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX27Q96L92 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
SNX27Q96L92 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNX27Q96L92 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNX27Q96L92 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.48■□□□□ 0.23
SNX27Q96L92 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNX27Q96L92 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.48■□□□□ 0.23
SNX27Q96L92 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.48■□□□□ 0.23
SNX27Q96L92 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms