Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 TMBIM7P-203ENST00000641617 1718 ntBASIC15.9■□□□□ 0.14
IFT43Q96FT9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IFT43Q96FT9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.9■□□□□ 0.14
IFT43Q96FT9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SPDYE19P-201ENST00000338590 713 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC074338.1-201ENST00000416825 156 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC055876.2-201ENST00000531834 546 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 TIMM17BP1-201ENST00000545713 516 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SRD5A3P1-201ENST00000603021 949 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC099568.2-201ENST00000609194 695 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC138969.3-201ENST00000546612 1459 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC138932.2-201ENST00000548268 1459 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 AC126755.4-201ENST00000549796 1459 ntBASIC15.89■□□□□ 0.13
IFT43Q96FT9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IFT43Q96FT9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.89■□□□□ 0.13
IFT43Q96FT9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
IFT43Q96FT9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IFT43Q96FT9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms