Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
GCN1Q92616 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.93□□□□□ -0.34
GCN1Q92616 AL080243.1-201ENST00000423293 1060 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC12.93□□□□□ -0.34
GCN1Q92616 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 SEPHS2P1-201ENST00000511618 1162 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 AACSP1-202ENST00000521412 1095 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC12.93□□□□□ -0.34
GCN1Q92616 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC12.93□□□□□ -0.34
GCN1Q92616 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC12.93□□□□□ -0.34
GCN1Q92616 AL353708.1-201ENST00000567904 1257 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 BOLA3P2-201ENST00000586496 323 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 PDLIM1P1-201ENST00000604187 969 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 AC006449.5-201ENST00000610658 2098 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.93□□□□□ -0.34
GCN1Q92616 XBP1P1-201ENST00000436573 652 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.93□□□□□ -0.34
GCN1Q92616 AC004066.1-201ENST00000502488 802 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC12.93□□□□□ -0.34
GCN1Q92616 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC12.93□□□□□ -0.34
GCN1Q92616 AC120498.7-201ENST00000562876 330 ntBASIC12.93□□□□□ -0.34
GCN1Q92616 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GCN1Q92616 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GCN1Q92616 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 AC005052.1-201ENST00000625181 2492 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 AL359092.2-201ENST00000423330 585 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 AP000533.1-201ENST00000456143 1177 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 RN7SL487P-201ENST00000468140 344 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 AC004923.3-201ENST00000527532 355 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.92□□□□□ -0.34
GCN1Q92616 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 RN7SL478P-201ENST00000584358 298 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.92□□□□□ -0.34
GCN1Q92616 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 AL590440.2-201ENST00000641973 1595 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 AC138761.6-201ENST00000583997 1423 ntBASIC12.92□□□□□ -0.34
GCN1Q92616 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
GCN1Q92616 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
GCN1Q92616 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC12.92□□□□□ -0.34
GCN1Q92616 ALMS1P1-201ENST00000428767 921 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms