Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 AC007969.1-201ENST00000433675 447 ntBASIC15.34■□□□□ 0.05
CHD5Q8TDI0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 AL590440.2-201ENST00000641973 1595 ntBASIC15.34■□□□□ 0.05
CHD5Q8TDI0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD5Q8TDI0 AL596257.1-201ENST00000641463 2694 ntBASIC15.34■□□□□ 0.05
CHD5Q8TDI0 TNRC18P2-201ENST00000417666 2714 ntBASIC15.34■□□□□ 0.05
CHD5Q8TDI0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.33■□□□□ 0.05
CHD5Q8TDI0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AL354877.1-201ENST00000424412 413 ntBASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AC022210.1-201ENST00000449856 793 ntBASIC15.33■□□□□ 0.04
CHD5Q8TDI0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 RNA5SP412-201ENST00000516234 123 ntBASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 RN7SL560P-201ENST00000577943 264 ntBASIC15.33■□□□□ 0.04
CHD5Q8TDI0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AL359881.2-201ENST00000602973 570 ntBASIC15.33■□□□□ 0.04
CHD5Q8TDI0 AL358472.3-201ENST00000608147 415 ntBASIC15.33■□□□□ 0.04
CHD5Q8TDI0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD5Q8TDI0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 FAM21FP-201ENST00000426241 1131 ntBASIC15.32■□□□□ 0.04
CHD5Q8TDI0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 AC138696.2-201ENST00000607376 223 ntBASIC15.32■□□□□ 0.04
CHD5Q8TDI0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD5Q8TDI0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms