Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 TATDN2P2-201ENST00000403590 2226 ntBASIC9.31□□□□□ -0.92
SVIPQ8NHG7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 AC090505.1-201ENST00000430515 1834 ntBASIC9.31□□□□□ -0.92
SVIPQ8NHG7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 CD9-212ENST00000610354 1315 ntTSL 5 BASIC9.31□□□□□ -0.92
SVIPQ8NHG7 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 AC092620.3-201ENST00000562796 2764 ntBASIC9.3□□□□□ -0.92
SVIPQ8NHG7 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ADAM21P1-201ENST00000529267 2170 ntBASIC9.3□□□□□ -0.92
SVIPQ8NHG7 AC125807.2-201ENST00000513358 3514 ntBASIC9.3□□□□□ -0.92
SVIPQ8NHG7 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ARSJ-201ENST00000315366 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 MUC20-204ENST00000445522 2842 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 TBX22-201ENST00000373294 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 AL445248.1-201ENST00000366152 624 ntTSL 3 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 MIR6089-201ENST00000616698 64 ntBASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 SLC22A8-203ENST00000430500 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 TMBIM7P-203ENST00000641617 1718 ntBASIC9.3□□□□□ -0.92
SVIPQ8NHG7 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 AC122688.3-201ENST00000623804 3467 ntBASIC9.3□□□□□ -0.92
SVIPQ8NHG7 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 TRIM29-201ENST00000341846 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SVIPQ8NHG7 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 IL18RAP-201ENST00000264260 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 AL390728.2-201ENST00000400933 1670 ntBASIC9.29□□□□□ -0.92
SVIPQ8NHG7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 AL805961.2-201ENST00000642139 4817 ntBASIC9.29□□□□□ -0.92
SVIPQ8NHG7 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 TCF4-222ENST00000564228 1915 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 CXCL12-203ENST00000374429 3532 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 PRRX1-207ENST00000497230 3501 ntTSL 2 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 SPIB-202ENST00000439922 3311 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
SVIPQ8NHG7 GALC-203ENST00000393569 2547 ntTSL 2 BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms