Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC012508.2-201ENST00000567613 1472 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC022137.2-201ENST00000503482 481 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 USP32P1-208ENST00000506594 1164 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC068587.3-201ENST00000526613 355 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PTP4A1P2-201ENST00000546033 454 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC015936.2-201ENST00000593177 259 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 AC134312.5-201ENST00000568031 1313 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 LINC00554-201ENST00000564841 3011 ntBASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RASGEF1AQ8N9B8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC023157.3-201ENST00000619086 2088 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AL139094.1-201ENST00000405549 1188 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 KLF2P2-201ENST00000416807 1039 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC012441.1-201ENST00000446669 685 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC114812.1-204ENST00000449669 728 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 SLC25A47P1-201ENST00000531577 414 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 AL360270.3-201ENST00000609118 1348 ntBASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RASGEF1AQ8N9B8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms