Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC093813.1-201ENST00000605066 256 ntBASIC14.31□□□□□ -0.12
BEST3Q8N1M1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 AC134312.5-201ENST00000568031 1313 ntBASIC14.31□□□□□ -0.12
BEST3Q8N1M1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BEST3Q8N1M1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 AC012441.1-201ENST00000446669 685 ntBASIC14.3□□□□□ -0.12
BEST3Q8N1M1 KLF2P4-201ENST00000451959 1225 ntBASIC14.3□□□□□ -0.12
BEST3Q8N1M1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 AC010491.1-201ENST00000563101 2797 ntBASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST3Q8N1M1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST3Q8N1M1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms