Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC092127.1-201ENST00000567093 3455 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 TMEM14DP-201ENST00000422205 345 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KRT43P-201ENST00000434019 910 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 U91328.1-201ENST00000437528 223 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KRT17P8-201ENST00000540749 863 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 PTP4A1P2-201ENST00000546033 454 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC008735.3-201ENST00000596646 500 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC093813.1-201ENST00000605066 256 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC107373.2-201ENST00000607735 490 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AL162274.1-201ENST00000617191 1098 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AL365209.1-201ENST00000624418 6473 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 AC127383.1-201ENST00000444697 1800 ntBASIC15.13■□□□□ 0.01
TRIM48Q8IWZ4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 CICP13-201ENST00000422015 2789 ntBASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ATP5G2P4-201ENST00000442175 420 ntBASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 AC026410.3-201ENST00000514280 936 ntBASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 IGHV3-71-201ENST00000523324 359 ntBASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 AC009486.1-201ENST00000569860 813 ntBASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM48Q8IWZ4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms