Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC090340.1-201ENST00000620778 4980 ntBASIC13.05□□□□□ -0.32
LRRK2Q5S007 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC004066.1-201ENST00000502488 802 ntBASIC13.05□□□□□ -0.32
LRRK2Q5S007 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRK2Q5S007 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRK2Q5S007 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AC010900.1-201ENST00000449849 1296 ntBASIC13.04□□□□□ -0.32
LRRK2Q5S007 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AC008825.2-201ENST00000603374 718 ntBASIC13.04□□□□□ -0.32
LRRK2Q5S007 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 MIR6746-201ENST00000620971 63 ntBASIC13.04□□□□□ -0.32
LRRK2Q5S007 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AC020910.5-201ENST00000623668 1865 ntBASIC13.04□□□□□ -0.32
LRRK2Q5S007 AC006449.5-201ENST00000610658 2098 ntBASIC13.04□□□□□ -0.32
LRRK2Q5S007 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRK2Q5S007 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRRK2Q5S007 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 BCL2L12P1-201ENST00000508390 733 ntBASIC13.03□□□□□ -0.32
LRRK2Q5S007 TREHP1-201ENST00000531328 465 ntBASIC13.03□□□□□ -0.32
LRRK2Q5S007 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AL645728.2-202ENST00000641679 227 ntBASIC13.03□□□□□ -0.32
LRRK2Q5S007 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AC055811.4-201ENST00000624039 1754 ntBASIC13.03□□□□□ -0.32
LRRK2Q5S007 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms