Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AC136604.1-201ENST00000418535 575 ntBASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AC142381.1-201ENST00000426099 345 ntBASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 FAAHP1-202ENST00000446499 1238 ntBASIC13.83□□□□□ -0.2
CCDC58Q4VC31 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC58Q4VC31 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 PDPK2P-202ENST00000562415 1191 ntBASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AC027307.2-201ENST00000591252 911 ntBASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AC011467.4-201ENST00000594891 528 ntBASIC13.82□□□□□ -0.2
CCDC58Q4VC31 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AC099522.2-201ENST00000607001 744 ntBASIC13.82□□□□□ -0.2
CCDC58Q4VC31 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.82□□□□□ -0.2
CCDC58Q4VC31 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC58Q4VC31 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 PPT1-213ENST00000641319 2388 ntBASIC13.81□□□□□ -0.2
CCDC58Q4VC31 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 AL928921.2-201ENST00000641325 2442 ntBASIC13.81□□□□□ -0.2
CCDC58Q4VC31 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CCDC58Q4VC31 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms