Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.34□□□□□ -0.11
CD47Q08722 AL671883.3-201ENST00000603274 991 ntBASIC14.34□□□□□ -0.11
CD47Q08722 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 SBF1P1-201ENST00000444527 5631 ntBASIC14.34□□□□□ -0.11
CD47Q08722 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.34□□□□□ -0.11
CD47Q08722 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CD47Q08722 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CD47Q08722 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.33□□□□□ -0.11
CD47Q08722 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.33□□□□□ -0.11
CD47Q08722 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CD47Q08722 ELL2P1-201ENST00000413990 1906 ntBASIC14.33□□□□□ -0.11
CD47Q08722 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CD47Q08722 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.33□□□□□ -0.12
CD47Q08722 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 AP000347.1-202ENST00000435868 847 ntBASIC14.33□□□□□ -0.12
CD47Q08722 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CD47Q08722 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.33□□□□□ -0.12
CD47Q08722 KRT8P23-201ENST00000560090 1207 ntBASIC14.33□□□□□ -0.12
CD47Q08722 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.33□□□□□ -0.12
CD47Q08722 AC005829.1-201ENST00000570002 483 ntBASIC14.33□□□□□ -0.12
CD47Q08722 AC061975.2-201ENST00000581722 295 ntBASIC14.33□□□□□ -0.12
CD47Q08722 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.33□□□□□ -0.12
CD47Q08722 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.33□□□□□ -0.12
CD47Q08722 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.33□□□□□ -0.12
CD47Q08722 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.33□□□□□ -0.12
CD47Q08722 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.33□□□□□ -0.12
CD47Q08722 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.33□□□□□ -0.12
CD47Q08722 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CD47Q08722 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CD47Q08722 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CD47Q08722 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CD47Q08722 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CD47Q08722 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 CICP11-201ENST00000434745 2827 ntBASIC14.32□□□□□ -0.12
CD47Q08722 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 FAM220BP-201ENST00000377689 816 ntBASIC14.32□□□□□ -0.12
CD47Q08722 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.32□□□□□ -0.12
CD47Q08722 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.32□□□□□ -0.12
CD47Q08722 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms