Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC092127.1-201ENST00000567093 3455 ntBASIC16.08■□□□□ 0.16
IRX4P78413 AC138035.3-201ENST00000622706 2791 ntBASIC16.08■□□□□ 0.16
IRX4P78413 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
IRX4P78413 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.08■□□□□ 0.16
IRX4P78413 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.08■□□□□ 0.16
IRX4P78413 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.08■□□□□ 0.16
IRX4P78413 AC007389.4-201ENST00000454674 793 ntBASIC16.08■□□□□ 0.16
IRX4P78413 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.08■□□□□ 0.16
IRX4P78413 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.08■□□□□ 0.16
IRX4P78413 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
IRX4P78413 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.08■□□□□ 0.16
IRX4P78413 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
IRX4P78413 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
IRX4P78413 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
IRX4P78413 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IRX4P78413 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.07■□□□□ 0.16
IRX4P78413 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 MIR4538-201ENST00000581377 78 ntBASIC16.07■□□□□ 0.16
IRX4P78413 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.07■□□□□ 0.16
IRX4P78413 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 AL109936.8-201ENST00000641772 604 ntBASIC16.07■□□□□ 0.16
IRX4P78413 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.07■□□□□ 0.16
IRX4P78413 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.07■□□□□ 0.16
IRX4P78413 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.07■□□□□ 0.16
IRX4P78413 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
IRX4P78413 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
IRX4P78413 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.07■□□□□ 0.16
IRX4P78413 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 AC006486.2-201ENST00000624246 2199 ntBASIC16.07■□□□□ 0.16
IRX4P78413 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
IRX4P78413 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
IRX4P78413 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 AC087481.3-201ENST00000602886 1894 ntBASIC16.06■□□□□ 0.16
IRX4P78413 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.06■□□□□ 0.16
IRX4P78413 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IRX4P78413 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IRX4P78413 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms