Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
VBP1P61758 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
VBP1P61758 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VBP1P61758 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 AC118758.2-201ENST00000614242 2813 ntBASIC13.83□□□□□ -0.2
VBP1P61758 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
VBP1P61758 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.83□□□□□ -0.2
VBP1P61758 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.82□□□□□ -0.2
VBP1P61758 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 AC138969.3-201ENST00000546612 1459 ntBASIC13.82□□□□□ -0.2
VBP1P61758 AC138932.2-201ENST00000548268 1459 ntBASIC13.82□□□□□ -0.2
VBP1P61758 AC126755.4-201ENST00000549796 1459 ntBASIC13.82□□□□□ -0.2
VBP1P61758 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.82□□□□□ -0.2
VBP1P61758 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
VBP1P61758 AC055811.4-201ENST00000624039 1754 ntBASIC13.82□□□□□ -0.2
VBP1P61758 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.82□□□□□ -0.2
VBP1P61758 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.82□□□□□ -0.2
VBP1P61758 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.82□□□□□ -0.2
VBP1P61758 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VBP1P61758 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VBP1P61758 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 PMS2P7-201ENST00000506558 1336 ntBASIC13.82□□□□□ -0.2
VBP1P61758 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
VBP1P61758 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VBP1P61758 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VBP1P61758 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
VBP1P61758 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VBP1P61758 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.81□□□□□ -0.2
VBP1P61758 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
VBP1P61758 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.81□□□□□ -0.2
VBP1P61758 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.81□□□□□ -0.2
VBP1P61758 KRT18P31-201ENST00000506277 1292 ntBASIC13.81□□□□□ -0.2
VBP1P61758 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VBP1P61758 AP000867.3-201ENST00000524675 377 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms