Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.71■□□□□ 0.59
TM4SF1P30408 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.71■□□□□ 0.59
TM4SF1P30408 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM4SF1P30408 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
TM4SF1P30408 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.71■□□□□ 0.58
TM4SF1P30408 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 REXO1L4P-201ENST00000605109 1937 ntBASIC18.7■□□□□ 0.58
TM4SF1P30408 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TM4SF1P30408 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TM4SF1P30408 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.7■□□□□ 0.58
TM4SF1P30408 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 ALG3P1-201ENST00000508806 1114 ntBASIC18.7■□□□□ 0.58
TM4SF1P30408 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.7■□□□□ 0.58
TM4SF1P30408 PHBP15-201ENST00000574228 665 ntBASIC18.7■□□□□ 0.58
TM4SF1P30408 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC18.7■□□□□ 0.58
TM4SF1P30408 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.7■□□□□ 0.58
TM4SF1P30408 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.7■□□□□ 0.58
TM4SF1P30408 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 CICP11-201ENST00000434745 2827 ntBASIC18.7■□□□□ 0.58
TM4SF1P30408 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TM4SF1P30408 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM4SF1P30408 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TM4SF1P30408 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TM4SF1P30408 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 AP000356.3-201ENST00000382243 753 ntBASIC18.69■□□□□ 0.58
TM4SF1P30408 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF1P30408 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF1P30408 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.69■□□□□ 0.58
TM4SF1P30408 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.69■□□□□ 0.58
TM4SF1P30408 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TM4SF1P30408 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.69■□□□□ 0.58
TM4SF1P30408 BX088702.1-201ENST00000610784 235 ntBASIC18.69■□□□□ 0.58
TM4SF1P30408 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM4SF1P30408 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.69■□□□□ 0.58
TM4SF1P30408 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.68■□□□□ 0.58
TM4SF1P30408 PRORSD1P-202ENST00000563365 2154 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.68■□□□□ 0.58
TM4SF1P30408 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.68■□□□□ 0.58
TM4SF1P30408 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TM4SF1P30408 AL512430.1-201ENST00000392575 860 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.68■□□□□ 0.58
TM4SF1P30408 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.68■□□□□ 0.58
TM4SF1P30408 CICP12-201ENST00000455801 843 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 NDUFS6P1-201ENST00000485187 316 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms