Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.05■□□□□ 0.32
COL11A1P12107 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.05■□□□□ 0.32
COL11A1P12107 CU633904.3-201ENST00000624042 1029 ntBASIC17.05■□□□□ 0.32
COL11A1P12107 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.05■□□□□ 0.32
COL11A1P12107 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COL11A1P12107 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.04■□□□□ 0.32
COL11A1P12107 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.04■□□□□ 0.32
COL11A1P12107 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
COL11A1P12107 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 ELK2AP-201ENST00000392510 1007 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 AL133466.1-201ENST00000447582 150 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 TUBB8P8-201ENST00000458717 1058 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 IGLV3-15-201ENST00000518356 244 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.04■□□□□ 0.32
COL11A1P12107 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.04■□□□□ 0.32
COL11A1P12107 RBM8B-201ENST00000555532 525 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.04■□□□□ 0.32
COL11A1P12107 SNORD3B-2-202ENST00000571722 791 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COL11A1P12107 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COL11A1P12107 AL132994.2-201ENST00000603120 687 ntBASIC17.04■□□□□ 0.32
COL11A1P12107 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COL11A1P12107 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.04■□□□□ 0.32
COL11A1P12107 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL11A1P12107 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.04■□□□□ 0.32
COL11A1P12107 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.03■□□□□ 0.32
COL11A1P12107 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.03■□□□□ 0.32
COL11A1P12107 AC100827.2-201ENST00000563214 1194 ntBASIC17.03■□□□□ 0.32
COL11A1P12107 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.03■□□□□ 0.32
COL11A1P12107 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.03■□□□□ 0.32
COL11A1P12107 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.03■□□□□ 0.32
COL11A1P12107 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL11A1P12107 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
COL11A1P12107 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
COL11A1P12107 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL11A1P12107 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 AC136759.1-202ENST00000530858 2194 ntBASIC17.03■□□□□ 0.32
COL11A1P12107 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL11A1P12107 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL11A1P12107 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.03■□□□□ 0.32
COL11A1P12107 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.03■□□□□ 0.32
COL11A1P12107 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL11A1P12107 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.03■□□□□ 0.32
COL11A1P12107 AC104073.2-201ENST00000453737 312 ntBASIC17.03■□□□□ 0.32
COL11A1P12107 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.03■□□□□ 0.32
COL11A1P12107 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.03■□□□□ 0.32
COL11A1P12107 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 AC131206.1-201ENST00000538078 1211 ntBASIC17.03■□□□□ 0.32
COL11A1P12107 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
COL11A1P12107 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.03■□□□□ 0.32
COL11A1P12107 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.03■□□□□ 0.32
COL11A1P12107 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.03■□□□□ 0.32
COL11A1P12107 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.03■□□□□ 0.32
COL11A1P12107 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL11A1P12107 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL11A1P12107 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL11A1P12107 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL11A1P12107 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms