Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 RN7SL713P-201ENST00000582127 302 ntBASIC17.99■□□□□ 0.47
HLA-DOAP06340 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DOAP06340 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.99■□□□□ 0.47
HLA-DOAP06340 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AL023775.1-201ENST00000454907 1746 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 KRT8P13-201ENST00000463294 1010 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AP001258.2-201ENST00000529891 490 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 AC104982.3-201ENST00000581995 514 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 MIR3615-201ENST00000581999 87 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 PPY2P-201ENST00000582808 702 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AL008638.5-201ENST00000623814 1298 ntBASIC17.98■□□□□ 0.47
HLA-DOAP06340 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HLA-DOAP06340 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.98■□□□□ 0.47
HLA-DOAP06340 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 FTLP10-202ENST00000505798 471 ntBASIC17.97■□□□□ 0.47
HLA-DOAP06340 AL391280.1-201ENST00000506969 1062 ntBASIC17.97■□□□□ 0.47
HLA-DOAP06340 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 AC106820.3-201ENST00000561653 397 ntBASIC17.97■□□□□ 0.47
HLA-DOAP06340 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.97■□□□□ 0.47
HLA-DOAP06340 ZACNP1-201ENST00000612259 710 ntBASIC17.97■□□□□ 0.47
HLA-DOAP06340 AC244157.2-201ENST00000616239 1006 ntBASIC17.97■□□□□ 0.47
HLA-DOAP06340 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-DOAP06340 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms