Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.36■□□□□ 0.53
CHGBP05060 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 FAM197Y7-201ENST00000432892 766 ntBASIC18.36■□□□□ 0.53
CHGBP05060 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.36■□□□□ 0.53
CHGBP05060 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.36■□□□□ 0.53
CHGBP05060 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHGBP05060 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 IGHV3-71-201ENST00000523324 359 ntBASIC18.36■□□□□ 0.53
CHGBP05060 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHGBP05060 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 AC106886.1-201ENST00000568660 600 ntBASIC18.36■□□□□ 0.53
CHGBP05060 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 AJ011931.1-201ENST00000618749 2492 ntBASIC18.36■□□□□ 0.53
CHGBP05060 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.36■□□□□ 0.53
CHGBP05060 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CHGBP05060 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.35■□□□□ 0.53
CHGBP05060 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHGBP05060 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.35■□□□□ 0.53
CHGBP05060 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.35■□□□□ 0.53
CHGBP05060 AC007551.1-201ENST00000457394 519 ntBASIC18.35■□□□□ 0.53
CHGBP05060 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.35■□□□□ 0.53
CHGBP05060 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 AC025279.2-201ENST00000569730 653 ntBASIC18.35■□□□□ 0.53
CHGBP05060 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
CHGBP05060 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.35■□□□□ 0.53
CHGBP05060 LINC02228-204ENST00000642115 2962 ntBASIC18.35■□□□□ 0.53
CHGBP05060 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHGBP05060 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHGBP05060 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 AL596257.1-201ENST00000641463 2694 ntBASIC18.35■□□□□ 0.53
CHGBP05060 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHGBP05060 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.34■□□□□ 0.53
CHGBP05060 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHGBP05060 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHGBP05060 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CHGBP05060 CTBP2P5-201ENST00000454986 1264 ntBASIC18.34■□□□□ 0.53
CHGBP05060 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.34■□□□□ 0.53
CHGBP05060 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 AL022328.1-201ENST00000610050 478 ntBASIC18.34■□□□□ 0.53
CHGBP05060 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHGBP05060 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHGBP05060 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms