Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRNA1P02708 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRNA1P02708 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRNA1P02708 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHRNA1P02708 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.53■□□□□ 0.24
CHRNA1P02708 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 RN7SKP175-201ENST00000408472 289 ntBASIC16.53■□□□□ 0.24
CHRNA1P02708 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.53■□□□□ 0.24
CHRNA1P02708 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.53■□□□□ 0.24
CHRNA1P02708 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.53■□□□□ 0.24
CHRNA1P02708 AC022217.1-201ENST00000521069 738 ntBASIC16.53■□□□□ 0.24
CHRNA1P02708 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.53■□□□□ 0.24
CHRNA1P02708 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.53■□□□□ 0.24
CHRNA1P02708 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 RN7SL774P-201ENST00000577467 290 ntBASIC16.53■□□□□ 0.24
CHRNA1P02708 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 BNIP3P13-201ENST00000599968 566 ntBASIC16.53■□□□□ 0.24
CHRNA1P02708 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 AC009093.2-202ENST00000620513 2079 ntBASIC16.53■□□□□ 0.24
CHRNA1P02708 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHRNA1P02708 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRNA1P02708 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHRNA1P02708 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHRNA1P02708 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.53■□□□□ 0.24
CHRNA1P02708 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRNA1P02708 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRNA1P02708 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRNA1P02708 PCDHA1-201ENST00000378133 2726 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRNA1P02708 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRNA1P02708 RN7SL769P-201ENST00000469386 295 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 IMP3P2-201ENST00000489760 475 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.52■□□□□ 0.24
CHRNA1P02708 AC005740.2-201ENST00000511085 419 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.52■□□□□ 0.24
CHRNA1P02708 AL645939.5-201ENST00000606834 243 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRNA1P02708 AP001505.2-201ENST00000616815 443 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 AC015967.2-201ENST00000624092 234 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 AC006435.4-201ENST00000625037 234 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 AL356737.1-201ENST00000634391 234 ntBASIC16.52■□□□□ 0.24
CHRNA1P02708 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.52■□□□□ 0.24
CHRNA1P02708 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CHRNA1P02708 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHRNA1P02708 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHRNA1P02708 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.52■□□□□ 0.23
CHRNA1P02708 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.52■□□□□ 0.23
CHRNA1P02708 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHRNA1P02708 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHRNA1P02708 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.52■□□□□ 0.23
CHRNA1P02708 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.52■□□□□ 0.23
CHRNA1P02708 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHRNA1P02708 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA1P02708 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA1P02708 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA1P02708 MIR769-201ENST00000390225 118 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms