Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 RN7SKP214-201ENST00000364208 315 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 RN7SKP230-201ENST00000365642 335 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CEACAM4O75871 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.77□□□□□ -0.21
CEACAM4O75871 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 E2F3P2-201ENST00000447755 1422 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.77□□□□□ -0.21
CEACAM4O75871 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 HLA-J-204ENST00000495278 958 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.77□□□□□ -0.21
CEACAM4O75871 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 AL160314.3-201ENST00000556041 767 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.77□□□□□ -0.21
CEACAM4O75871 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.77□□□□□ -0.21
CEACAM4O75871 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.77□□□□□ -0.21
CEACAM4O75871 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.77□□□□□ -0.21
CEACAM4O75871 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.77□□□□□ -0.21
CEACAM4O75871 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 AC132192.2-201ENST00000596206 1147 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 AC009093.2-202ENST00000620513 2079 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CEACAM4O75871 INE2-201ENST00000630399 1874 ntBASIC13.77□□□□□ -0.21
CEACAM4O75871 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.77□□□□□ -0.21
CEACAM4O75871 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CEACAM4O75871 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CEACAM4O75871 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.77□□□□□ -0.21
CEACAM4O75871 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.76□□□□□ -0.21
CEACAM4O75871 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.76□□□□□ -0.21
CEACAM4O75871 AL137783.1-201ENST00000623494 1896 ntBASIC13.76□□□□□ -0.21
CEACAM4O75871 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 AC011840.2-201ENST00000563063 1520 ntBASIC13.76□□□□□ -0.21
CEACAM4O75871 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 AL138725.1-201ENST00000407347 1314 ntBASIC13.76□□□□□ -0.21
CEACAM4O75871 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CEACAM4O75871 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.76□□□□□ -0.21
CEACAM4O75871 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.76□□□□□ -0.21
CEACAM4O75871 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 VDAC1P1-201ENST00000439229 848 ntBASIC13.76□□□□□ -0.21
CEACAM4O75871 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 AC009779.1-201ENST00000551138 283 ntBASIC13.76□□□□□ -0.21
CEACAM4O75871 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.76□□□□□ -0.21
CEACAM4O75871 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CEACAM4O75871 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.76□□□□□ -0.21
CEACAM4O75871 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.76□□□□□ -0.21
CEACAM4O75871 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CEACAM4O75871 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CEACAM4O75871 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CEACAM4O75871 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CEACAM4O75871 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CEACAM4O75871 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.75□□□□□ -0.21
CEACAM4O75871 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.75□□□□□ -0.21
CEACAM4O75871 AC009090.5-201ENST00000624886 2285 ntBASIC13.75□□□□□ -0.21
CEACAM4O75871 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CEACAM4O75871 AC012508.2-201ENST00000567613 1472 ntBASIC13.75□□□□□ -0.21
CEACAM4O75871 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CEACAM4O75871 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CEACAM4O75871 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CEACAM4O75871 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CEACAM4O75871 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CEACAM4O75871 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.75□□□□□ -0.21
CEACAM4O75871 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms