Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.69□□□□□ -0.06
LCMT2O60294 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LCMT2O60294 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.69□□□□□ -0.06
LCMT2O60294 AL157414.3-201ENST00000624276 1954 ntBASIC14.69□□□□□ -0.06
LCMT2O60294 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LCMT2O60294 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LCMT2O60294 LINC00528-201ENST00000600723 2160 ntBASIC14.68□□□□□ -0.06
LCMT2O60294 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 AC098614.1-201ENST00000368528 745 ntBASIC14.68□□□□□ -0.06
LCMT2O60294 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.68□□□□□ -0.06
LCMT2O60294 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
LCMT2O60294 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.68□□□□□ -0.06
LCMT2O60294 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.68□□□□□ -0.06
LCMT2O60294 RN7SL752P-201ENST00000463779 287 ntBASIC14.68□□□□□ -0.06
LCMT2O60294 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LCMT2O60294 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.68□□□□□ -0.06
LCMT2O60294 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LCMT2O60294 BX539320.1-201ENST00000623759 877 ntBASIC14.68□□□□□ -0.06
LCMT2O60294 WASH3P-207ENST00000560956 1394 ntBASIC14.68□□□□□ -0.06
LCMT2O60294 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 AC012508.2-201ENST00000567613 1472 ntBASIC14.68□□□□□ -0.06
LCMT2O60294 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LCMT2O60294 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LCMT2O60294 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LCMT2O60294 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LCMT2O60294 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.67□□□□□ -0.06
LCMT2O60294 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
LCMT2O60294 REXO1L5P-201ENST00000622260 2098 ntBASIC14.67□□□□□ -0.06
LCMT2O60294 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.67□□□□□ -0.06
LCMT2O60294 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.67□□□□□ -0.06
LCMT2O60294 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.67□□□□□ -0.06
LCMT2O60294 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.67□□□□□ -0.06
LCMT2O60294 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LCMT2O60294 AL162726.2-201ENST00000438986 1017 ntBASIC14.67□□□□□ -0.06
LCMT2O60294 RN7SL837P-201ENST00000463010 287 ntBASIC14.67□□□□□ -0.06
LCMT2O60294 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LCMT2O60294 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms