Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CXCL13O43927 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL13O43927 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL13O43927 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 AL162727.3-201ENST00000635661 2787 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 KRT8P44-201ENST00000441609 1350 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 RNU1-114P-201ENST00000365297 166 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 NUS1P3-201ENST00000423502 862 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 U91328.1-201ENST00000437528 223 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 AC012441.1-201ENST00000446669 685 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 AL355864.2-201ENST00000447420 863 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 BCRP2-202ENST00000447763 634 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.74□□□□□ -0.21
CXCL13O43927 AC022137.2-201ENST00000503482 481 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 KRT18P25-201ENST00000508931 1278 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 BCRP6-201ENST00000510112 632 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 BCRP7-201ENST00000511549 544 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.74□□□□□ -0.21
CXCL13O43927 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCL13O43927 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL13O43927 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCL13O43927 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL13O43927 BTNL10-201ENST00000595971 695 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 AC233724.13-201ENST00000598383 410 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL13O43927 AP005019.2-201ENST00000615104 511 ntBASIC13.74□□□□□ -0.21
CXCL13O43927 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL13O43927 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CXCL13O43927 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
CXCL13O43927 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CXCL13O43927 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CXCL13O43927 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL13O43927 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CXCL13O43927 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 AC018665.1-201ENST00000622927 1362 ntBASIC13.73□□□□□ -0.21
CXCL13O43927 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.73□□□□□ -0.21
CXCL13O43927 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCL13O43927 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CXCL13O43927 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CXCL13O43927 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCL13O43927 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CXCL13O43927 GHSR-202ENST00000427970 912 ntBASIC13.73□□□□□ -0.21
CXCL13O43927 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCL13O43927 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CXCL13O43927 AP001889.1-201ENST00000525414 633 ntBASIC13.73□□□□□ -0.21
CXCL13O43927 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.73□□□□□ -0.21
CXCL13O43927 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CXCL13O43927 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.73□□□□□ -0.21
CXCL13O43927 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CXCL13O43927 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms